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Bernd Bodenmiller, Stefanie Wanka, Claudine Kraft, Jörg Urban, David Campbell, Patrick G. Pedrioli, Bertran Gerrits, Paola Picotti, Henry Lam, Olga Vitek, Mi-Youn Brusniak, Bernd Roschitzki, Chao Zhang, Kevan M. Shokat, Ralph Schlapbach, Alejandro Colman-Lerner, Garry P. Nolan, Alexey I. Nesvizhskii, Matthias Peter, Robbie Loewith, Christian von Mering, and Ruedi Aebersold    Science Signaling, Vol. 3, Issue 153, p. rs4 (2010)
Phosphoproteomic Analysis Reveals Interconnected System-Wide Responses to Perturbations of Kinases and Phosphatases in Yeast

Bernd Bodenmiller, David Campbell, Bertran Gerrits, Henry Lam, Marko Jovanovic, Paola Picotti, Ralph Schlapbach & Ruedi Aebersold   Nature Biotechnology 26, 1339 - 1340 (2008).
PhosphoPep—a database of protein phosphorylation sites in model organisms

Bernd Bodenmiller, Johan Malmstrom, Bertran Gerrits, David Campbell, Henry Lam, Alexander Schmidt, Oliver Rinner, Lukas N Mueller, Paul T Shannon, Patrick G Pedrioli, Christian Panse, Hoo-Keun Lee, Ralph Schlapbach, Ruedi Aebersold   Molecular Systems Biology. 2007 Oct; 3 (139).
PhosphoPep—a phosphoproteome resource for systems biology research in Drosophila Kc167 cells

Bodenmiller B, Mueller LN, Mueller M, Domon B, Aebersold R.   Nat Methods. 2007 Mar;4(3):231-7. Epub 2007 Feb 11.
Reproducible isolation of distinct, overlapping segments of the phosphoproteome.

Bodenmiller B, Mueller LN, Pedrioli PG, Pflieger D, Junger MA, Eng JK, Aebersold R, Tao WA.   Mol Biosyst. 2007 Apr;3(4):275-86. Epub 2007 Feb 19.
An integrated chemical, mass spectrometric and computational strategy for (quantitative) phosphoproteomics: application to Drosophila melanogaster Kc167 cells.

Tao WA, Wollscheid B, O'Brien R, Eng JK, Li XJ, Bodenmiller B, Watts JD, Hood L, Aebersold R.   Nat Methods. 2005 Aug;2(8):591-8.
Quantitative phosphoproteome analysis using a dendrimer conjugation chemistry and tandem mass spectrometry.

Zhou H, Watts JD, Aebersold R.   Nat Biotechnol. 2001 Apr;19(4):375-8.
A systematic approach to the analysis of protein phosphorylation.

Please use this publication when citing phosphopep.



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